About
SpaceTx
People
SpaceJam Hackathon
Data
Results and Analysis
Publications
Contributing Guidelines
Search
About SpaceTx
Introduction
Related Projects and Ongoing Work
Commercial Systems for Spatial Transcriptomics
SpaceTx Data
Downloadable Datasets
Experimental Methods
Consensus Taxonomy and Marker Genes
Cell Type Identification in single cell RNASeq data
Marker Gene Selection
Segmentation and Cell Type Mapping
Cell Segmentation
Cell Type Mapping Methods
Cell Type Mapping Consensus
Visium Data Single Cell Mapping
Software, Data Visualization and Example Notebooks
Data Formatting Standards and Computational Pipelines
Data Visualization
R Markdowns / Jupyter Notebooks & Scripts
Software Packages
SpaceTx Publications
Contributing Guidelines